Closed
Description
see SciML/OrdinaryDiffEq.jl#1493
I wasn't able to find a smaller reproducer and couldn't find any related issues here
environment
julia> versioninfo()
Julia Version 1.7.0-rc1
Commit 9eade6195e (2021-09-12 06:45 UTC)
Platform Info:
OS: macOS (arm64-apple-darwin20.5.0)
CPU: Apple M1
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-12.0.1 (ORCJIT, cyclone)
Environment:
JULIA_NUM_THREADS = 4
JULIA_EDITOR = code
(MTK) pkg> st
Project MTK v0.1.0
Status `~/.julia/dev/MTK/Project.toml`
[479239e8] Catalyst v9.0.0
[82cc6244] DataInterpolations v3.6.0
[9fdde737] DiffEqOperators v4.32.0
[0c46a032] DifferentialEquations v6.19.0
[5b8099bc] DomainSets v0.5.6
[961ee093] ModelingToolkit v6.4.9
[1dea7af3] OrdinaryDiffEq v5.64.0
[91a5bcdd] Plots v1.22.0
[0c5d862f] Symbolics v3.2.3
[1986cc42] Unitful v1.9.0
mwe
using OrdinaryDiffEq, ModelingToolkit, DiffEqOperators, DomainSets
@parameters t x
@parameters Dn, Dp
@variables u(..) v(..)
Dt = Differential(t)
Dx = Differential(x)
Dxx = Differential(x)^2
eqs = [Dt(u(t,x)) ~ Dn * Dxx(u(t,x)) + u(t,x)*v(t,x),
Dt(v(t,x)) ~ Dp * Dxx(v(t,x)) - u(t,x)*v(t,x)]
bcs = [u(0,x) ~ sin(pi*x/2),
v(0,x) ~ sin(pi*x/2),
u(t,0) ~ 0.0, Dx(u(t,1)) ~ 0.0,
v(t,0) ~ 0.0, Dx(v(t,1)) ~ 0.0]
domains = [t ∈ Interval(0.0,1.0),
x ∈ Interval(0.0,1.0)]
@named pdesys = PDESystem(eqs,bcs,domains,[t,x],[u(t,x),v(t,x)],[Dn=>0.5, Dp=>2])
discretization = MOLFiniteDifference([x=>0.1],t)
prob = discretize(pdesys,discretization)
sol = solve(prob,Tsit5())
trace
julia> sol = solve(prob,Tsit5())
signal (11): Segmentation fault: 11
in expression starting at REPL[16]:1
ndigits0zpb at ./intfuncs.jl:0
ndigits0z at ./intfuncs.jl:605
< at ./rational.jl:408
ode_determine_initdt at /Users/anand/.julia/packages/OrdinaryDiffEq/8K0Aj/src/initdt.jl:120
auto_dt_reset! at /Users/anand/.julia/packages/OrdinaryDiffEq/8K0Aj/src/integrators/integrator_interface.jl:329 [inlined]
handle_dt! at /Users/anand/.julia/packages/OrdinaryDiffEq/8K0Aj/src/solve.jl:504
#__init#476 at /Users/anand/.julia/packages/OrdinaryDiffEq/8K0Aj/src/solve.jl:466
__init at /Users/anand/.julia/packages/OrdinaryDiffEq/8K0Aj/src/solve.jl:67
__init at /Users/anand/.julia/packages/OrdinaryDiffEq/8K0Aj/src/solve.jl:67 [inlined]
__init at /Users/anand/.julia/packages/OrdinaryDiffEq/8K0Aj/src/solve.jl:67 [inlined]
__init at /Users/anand/.julia/packages/OrdinaryDiffEq/8K0Aj/src/solve.jl:67 [inlined]
__init at /Users/anand/.julia/packages/OrdinaryDiffEq/8K0Aj/src/solve.jl:67 [inlined]
#__solve#475 at /Users/anand/.julia/packages/OrdinaryDiffEq/8K0Aj/src/solve.jl:4 [inlined]
__solve at /Users/anand/.julia/packages/OrdinaryDiffEq/8K0Aj/src/solve.jl:4 [inlined]
#solve_call#42 at /Users/anand/.julia/packages/DiffEqBase/OPDgm/src/solve.jl:61 [inlined]
solve_call at /Users/anand/.julia/packages/DiffEqBase/OPDgm/src/solve.jl:48 [inlined]
#solve_up#44 at /Users/anand/.julia/packages/DiffEqBase/OPDgm/src/solve.jl:87 [inlined]
solve_up at /Users/anand/.julia/packages/DiffEqBase/OPDgm/src/solve.jl:78 [inlined]
#solve#43 at /Users/anand/.julia/packages/DiffEqBase/OPDgm/src/solve.jl:73 [inlined]
solve at /Users/anand/.julia/packages/DiffEqBase/OPDgm/src/solve.jl:68
unknown function (ip: 0x10f4167ab)
jl_apply_generic at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
do_call at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
eval_body at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
jl_interpret_toplevel_thunk at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
jl_toplevel_eval_flex at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
jl_toplevel_eval_flex at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
jl_toplevel_eval_flex at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
jl_toplevel_eval_in at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
eval at ./boot.jl:373 [inlined]
eval_user_input at /Users/sabae/src/julia/usr/share/julia/stdlib/v1.7/REPL/src/REPL.jl:150
repl_backend_loop at /Users/sabae/src/julia/usr/share/julia/stdlib/v1.7/REPL/src/REPL.jl:244
start_repl_backend at /Users/sabae/src/julia/usr/share/julia/stdlib/v1.7/REPL/src/REPL.jl:229
#run_repl#47 at /Users/sabae/src/julia/usr/share/julia/stdlib/v1.7/REPL/src/REPL.jl:362
run_repl at /Users/sabae/src/julia/usr/share/julia/stdlib/v1.7/REPL/src/REPL.jl:349
jl_apply_generic at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
#929 at ./client.jl:394
jfptr_YY.929_33876 at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/sys.dylib (unknown line)
jl_apply_generic at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
jl_f__call_latest at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
#invokelatest#2 at ./essentials.jl:716 [inlined]
invokelatest at ./essentials.jl:714 [inlined]
run_main_repl at ./client.jl:379
exec_options at ./client.jl:309
_start at ./client.jl:495
jfptr__start_33611 at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/sys.dylib (unknown line)
jl_apply_generic at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
true_main at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
jl_repl_entrypoint at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
Allocations: 207032348 (Pool: 206988583; Big: 43765); GC: 123
ive tested that it works on linux 1.7rc1