-
Notifications
You must be signed in to change notification settings - Fork 603
Minor Funcotator WDL updates. #6326
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Conversation
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
One very minor commnet
scripts/funcotator_wdl/README.md
Outdated
@@ -86,6 +86,6 @@ The follwing is an example of a JSON input file. It will not work as-is but is | |||
|
|||
## Further Information | |||
- https://software.broadinstitute.org/gatk/documentation/article?id=11193 | |||
- https://software.broadinstitute.org/gatk/documentation/tooldocs/4.1.2.0/org_broadinstitute_hellbender_tools_funcotator_Funcotator.php | |||
- https://software.broadinstitute.org/gatk/documentation/tooldocs/current/org_broadinstitute_hellbender_tools_funcotator_Funcotator.php |
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
I think generally we should pin this to a version corresponding to what is actually run. https://software.broadinstitute.org/gatk/documentation/tooldocs/4.1.4.0/org_broadinstitute_hellbender_tools_funcotator_Funcotator.php
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
fixed.
No description provided.