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Merge pull request #872 from d4straub/strict-nextflow #1682

Merge pull request #872 from d4straub/strict-nextflow

Merge pull request #872 from d4straub/strict-nextflow #1682

GitHub Actions / JUnit Test Report failed Apr 28, 2025 in 0s

1 tests run, 0 passed, 0 skipped, 1 failed.

Annotations

Check failure on line 1 in Custom QIIME2 Reference Taxonomy Database

See this annotation in the file changed.

@github-actions github-actions / JUnit Test Report

Custom QIIME2 Reference Taxonomy Database

Assertion failed: 

18 of 20 assertions failed
Raw output
Nextflow stdout:

ERROR ~ Failed to publish file: /home/runner/work/ampliseq/ampliseq/.nf-test/tests/426c81daeb6712e33b8769dc2ab56325/work/72/146291349cc6a1bfa459c1794b0f2e/sampleID_1.trimmed.cutadapt.log; to: /home/runner/work/ampliseq/ampliseq/.nf-test/tests/426c81daeb6712e33b8769dc2ab56325/output/cutadapt/sampleID_1.trimmed.cutadapt.log [copy] -- See log file for details

 -- Check '/home/runner/work/ampliseq/ampliseq/.nf-test/tests/426c81daeb6712e33b8769dc2ab56325/meta/nextflow.log' file for details
ERROR ~ Pipeline failed. Please refer to troubleshooting docs: https://nf-co.re/docs/usage/troubleshooting

 -- Check '/home/runner/work/ampliseq/ampliseq/.nf-test/tests/426c81daeb6712e33b8769dc2ab56325/meta/nextflow.log' file for details
Nextflow stderr: