Skip to content
@rsinghlab

Singh Lab @ Brown

Repository for projects developed in the lab

Popular repositories Loading

  1. MADDi MADDi Public

    This repository is for the Multimodal Alzheimer’s Disease Diagnosis framework (MADDi).

    Jupyter Notebook 99 18

  2. pyaging pyaging Public

    A Python-based compendium of GPU-optimized aging clocks.

    Jupyter Notebook 94 3

  3. SCOT SCOT Public

    Gromov-Wasserstein based optimal transport for aligning single-cell multi-omics data

    Jupyter Notebook 71 17

  4. AltumAge AltumAge Public

    Jupyter Notebook 30 9

  5. GNN-Tumor-Seg GNN-Tumor-Seg Public

    Using Graph Neural Networks to Segment MRIs of Brain Tumors

    Python 23 6

  6. scNODE scNODE Public

    scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction

    Jupyter Notebook 19 2

Repositories

Showing 10 of 27 repositories
  • K-Paths Public

    Official Implementation of K-Paths: Reasoning over Graph Paths for Drug Repurposing and Drug Interaction Prediction.

    rsinghlab/K-Paths’s past year of commit activity
    Python 11 0 0 0 Updated May 5, 2025
  • pyaging Public

    A Python-based compendium of GPU-optimized aging clocks.

    rsinghlab/pyaging’s past year of commit activity
    Jupyter Notebook 94 BSD-3-Clause 3 1 0 Updated Apr 30, 2025
  • QZERO Public

    Retrieval Augmented Zero-Shot Text Classification

    rsinghlab/QZERO’s past year of commit activity
    Python 5 0 0 0 Updated Apr 24, 2025
  • rsinghlab/ML_epigenetic_features_glioblastoma’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Apr 21, 2025
  • scContrast Public

    A contrastive learning based approach to learn universal cell representation

    rsinghlab/scContrast’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Apr 20, 2025
  • STING Public

    Spatial Transcriptomics cluster Inference with Nested GNNs

    rsinghlab/STING’s past year of commit activity
    Python 0 0 0 0 Updated Mar 13, 2025
  • Shape-Blind Public
    rsinghlab/Shape-Blind’s past year of commit activity
    Jupyter Notebook 8 0 1 0 Updated Mar 4, 2025
  • TimeFlies Public
    rsinghlab/TimeFlies’s past year of commit activity
    Jupyter Notebook 2 0 0 0 Updated Feb 6, 2025
  • HistoneClocks Public

    This repository contains the code and data to reproduce the results of our paper entitled "Histone mark age of human tissues and cells".

    rsinghlab/HistoneClocks’s past year of commit activity
    Jupyter Notebook 2 MIT 0 0 0 Updated Jan 3, 2025
  • scMultiNODE Public

    scMultiNODE: Temporal Single-Cell Data Integration across Unaligned Modalities

    rsinghlab/scMultiNODE’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Nov 1, 2024

Top languages

Loading…

Most used topics

Loading…