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fix: include alignment printer in debug_stream.h #3355

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Merged
merged 3 commits into from
Apr 1, 2025

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@SGSSGene SGSSGene commented Apr 1, 2025

includes the debug_stream_alignment.hpp in debug_stream.hpp for proper printing. see #3309 for more details on the issue.

@SGSSGene SGSSGene requested a review from eseiler April 1, 2025 12:14
@seqan-actions seqan-actions added lint [INTERNAL] signal for linting and removed lint [INTERNAL] signal for linting labels Apr 1, 2025
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Documentation preview available at https://docs.seqan.de/preview/seqan/seqan3/3355

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codecov bot commented Apr 1, 2025

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 98.11%. Comparing base (1590dcc) to head (e7d7999).
Report is 4 commits behind head on main.

Additional details and impacted files
@@           Coverage Diff           @@
##             main    #3355   +/-   ##
=======================================
  Coverage   98.11%   98.11%           
=======================================
  Files         270      270           
  Lines       11913    11913           
  Branches      103      103           
=======================================
  Hits        11689    11689           
  Misses        224      224           

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@seqan-actions seqan-actions added lint [INTERNAL] signal for linting and removed lint [INTERNAL] signal for linting labels Apr 1, 2025
@SGSSGene SGSSGene force-pushed the fix/debug_stream_alignment_in_all branch from c3e4272 to d2fde4b Compare April 1, 2025 14:00
@seqan-actions seqan-actions added lint [INTERNAL] signal for linting and removed lint [INTERNAL] signal for linting labels Apr 1, 2025
@eseiler eseiler linked an issue Apr 1, 2025 that may be closed by this pull request
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@eseiler eseiler force-pushed the fix/debug_stream_alignment_in_all branch from d2fde4b to e7d7999 Compare April 1, 2025 18:56
@eseiler eseiler enabled auto-merge April 1, 2025 18:57
@seqan-actions seqan-actions added lint [INTERNAL] signal for linting and removed lint [INTERNAL] signal for linting labels Apr 1, 2025
@eseiler eseiler merged commit d8de8c3 into seqan:main Apr 1, 2025
40 checks passed
@SGSSGene SGSSGene deleted the fix/debug_stream_alignment_in_all branch April 2, 2025 13:01
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Alignment pretty printing issues
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