revise: have wdl-lint depend on wdl-analysis

[a-frantz]

Describe the problem or feature in addition to a link to the issues.

This PR exposes analysis (and type resolution) to wdl-lint. That required some very large refactors all over the codebase. I believe that I have ironed out all the issues, but let's kick the tires and what not before merging, because this is a lot of changes.

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[peterhuene]

This looks fantastic and I know was a huge effort to implement.

I have some comments, mostly minor stuff; the majority of the comments are duplicates where a simple thing was repeated.

[peterhuene]

Looks great!

[peterhuene]

re: CI failure, I think we can ignore it for this PR and create a separate fix for it.