- FMSI is able to perform dictionary queries, i.e. to return for present k-mers a hash value between 0 and |K|-1 (subcommand
hash) - FMSI has simplified CLI
- The parameter for path is now positional
- Removed some paramaters which were not necessary
- Query streaming is by default disabled and can be turned on
- The output of FMSI is now more detailed giving information not only about the percentage of found k-mers, but printing a presence bitmap for each k-mer
Due to the changes in CLI and output, this introduces breaking changes compared to v0.3.x